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Precision Clustering Made Simple: kscorer’s Guide to Auto-Selecting Optimal K-means Clusters | by Volodymyr Holomb | Nov, 2023

November 10, 2023
in AI Technology
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kscorer is a tool that simplifies the process of clustering and offers a practical approach to data analysis through advanced scoring and parallelization. It is developed by DALL-E-2 as described by the author.

Unsupervised machine learning, specifically clustering, is a difficult task in data science that is crucial for various practical business analytics projects. Clustering can be used on its own or as a component in complex data processing pipelines to improve the efficiency of other algorithms, such as recommender systems.

Scikit-Learn provides several proven clustering algorithms, but most of them are parametric and require setting the number of clusters, which is a major challenge in clustering. Traditionally, an iterative method is used to determine the optimal number of clusters by evaluating the results of clustering with different numbers of clusters. However, this technique has limitations.

The yellowbrick package is a commonly used tool for identifying the optimal number of clusters, but it has drawbacks, such as conflicting outcomes when evaluating multiple metrics and difficulties in identifying an elbow on the diagram. Additionally, working with large datasets can lead to resource consumption issues when iterating through a wide range of clusters. To address this, techniques like MiniBatchKMeans, which allows for parallel clustering, can be explored.

For advanced optimization of clustering routines, lesser-known techniques are described. These include dimensionality reduction through Principal Component Analysis (PCA) to improve the clustering process, using cosine similarity and Euclidean normalization to avoid pre-calculating distance matrices, relying on multi-metric assessments to determine the optimal number of clusters, and data sampling to address resource consumption issues and improve clustering results.

The kscorer package offers an implementation of these techniques, making it easier to determine the optimal number of clusters in a more robust and efficient manner.

It is recommended to scale the data before clustering to ensure that all features are on an equal footing and none dominate due to their magnitude. Common scaling techniques include standardization and Min-Max scaling.

There is a fundamental link between K-means clustering and PCA, as explored in Ding and He’s paper. Both techniques aim to represent data efficiently while minimizing reconstruction errors.

Similarly, there is a correlation between cosine similarity and Euclidean distance, which is important when using these measures interchangeably.

In the absence of ground truth cluster labels, the kscorer package provides a comprehensive set of indicators to assess the quality of clustering, including the Silhouette Coefficient, Calinski-Harabasz Index, Davies-Bouldin Index, Dunn Index, and Bayesian Information Criterion (BIC).

To overcome memory limitations and expedite data preprocessing and scoring operations, the kscorer package utilizes random data samples. This approach ensures robust results and adapts to datasets of different sizes and structures.

The process of using the kscorer package for K-means clustering involves splitting the dataset into train and test sets and fitting a model to detect the optimal number of clusters. The model automatically searches for the optimal number of clusters between 3 and 15. The scaled scores for all the metrics applied can be reviewed to determine the best number of clusters.

After determining the optimal number of clusters, the new cluster labels can be evaluated against the true labels. Additionally, the cluster labels can be used as targets in a classifier to assign cluster labels to new data.

Finally, the kscorer package provides an interactive perspective on the data, allowing for a fresh exploration of the clustering results.



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Tags: AutoSelectingClusteringClustersGuideHolombKmeanskscorerâsNovOptimalprecisionSimpleVolodymyr
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